NPTEL : NOC:BioInformatics - Algorithms and Applications (Biotechnology)

Co-ordinators : Prof. M. Michael Gromiha


Lecture 1 - Concepts and importance of Bioinformatics

Lecture 2 - Complexities in biological systems

Lecture 3 - DNA sequence analysis

Lecture 4 - Sequence based parameters

Lecture 5 - Database

Lecture 6 - Database categories

Lecture 7 - Protein structure and function - I

Lecture 8 - Protein structure and function - II

Lecture 9 - Protein sequence databases - I

Lecture 10 - Protein sequence databases - II

Lecture 11 - Pairwise alignment - I

Lecture 12 - Pairwise alignment - II

Lecture 13 - Uniprot Demo

Lecture 14 - Sequence alignment - I

Lecture 15 - Sequence alignment - II

Lecture 16 - Sequence alignment: Online resources - I

Lecture 17 - Sequence alignment: Online resources - II

Lecture 18 - Conservation score - I

Lecture 19 - Conservation score - II

Lecture 20 - Blast Demo

Lecture 21 - Phylogenetic trees - I

Lecture 22 - Phylogenetic trees - II

Lecture 23 - Protein sequence analysis - I

Lecture 24 - Protein sequence analysis - II

Lecture 25 - Hydrophobicity profiles

Lecture 26 - Patterns and PSSM profiles

Lecture 27 - Construction of Non-redundant datasets - I

Lecture 28 - Non-redundant datasets - II

Lecture 29 - Protein secondary structure

Lecture 30 - Secondary structure prediction - I

Lecture 31 - Secondary structure prediction - II

Lecture 32 - Secondary structure prediction - III

Lecture 33 - Protein tertiary structure - I

Lecture 34 - Protein tertiary structure - II

Lecture 35 - Protein structure analysis - I

Lecture 36 - Protein structure analysis - II

Lecture 37 - Protein structure analysis - III

Lecture 38 - Demo: PDB or Pymol or PDBParam

Lecture 39 - Protein structure analysis - IV

Lecture 40 - Protein structure prediction - I

Lecture 41 - Protein structure prediction - II

Lecture 42 - Protein stability - I

Lecture 43 - Protein stability - II

Lecture 44 - Demo: Homology Modelling

Lecture 45 - Stabilizing residues

Lecture 46 - Thermodynamic database

Lecture 47 - Stability of proteins upon mutations - I

Lecture 48 - Stability of proteins upon mutations - II

Lecture 49 - Demo: ProTherm

Lecture 50 - Protein folding rate - I

Lecture 51 - Protein folding rate - II

Lecture 52 - Protein interactions - I

Lecture 53 - Protein interactions - II

Lecture 54 - Computer aided drug design - I

Lecture 55 - Computer aided drug design - II

Lecture 56 - Virtual screening - I

Lecture 57 - Virtual screening - II

Lecture 58 - QSAR - I

Lecture 59 - QSAR - II

Lecture 60 - Demo: Autodock

Lecture 61 - awk programming - I

Lecture 62 - awk programming - II

Lecture 63 - Development of algorithms - I

Lecture 64 - Development of algorithms - II

Lecture 65 - Applications of bioinformatics - I

Lecture 66 - Applications of bioinformatics - II

Lecture 67 - Overview - I

Lecture 68 - Overview - II

Lecture 69 - Demo: Weka